BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C01LP1|AL428343
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1666 0.0
>3x_Contig1737
Length = 17214
Score = 1666 bits (840), Expect = 0.0
Identities = 855/858 (99%), Gaps = 2/858 (0%)
Strand = Plus / Minus
Query: 1 gatcttaccacggatggaaaccaaaccggtgaatggacacttcttgtcgatgtaagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3184 gatcttaccacggatggaaaccaaaccggtgaatggacacttcttgtcgatgtaagaacc 3125
Query: 61 ttcaatagcggtctttggggtcttgaaacccaaaccaacgttcttataccatctcttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3124 ttcaatagcggtctttggggtcttgaaacccaaaccaacgttcttataccatctcttggt 3065
Query: 121 ctttctgttggccttggcctttggattggtgaagatgtgaggttgctaataggaaagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 ctttctgttggccttggcctttggattggtgaagatgtgaggttgctaataggaaagttg 3005
Query: 181 tgaagaaattagttagtaaaacgaacatatggtagattaacatatattgaatcaaatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3004 tgaagaaattagttagtaaaacgaacatatggtagattaacatatattgaatcaaatcct 2945
Query: 241 ggaaagtcattagaattggtgcacataggtgtactggtaatcttctgcattacggtatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2944 ggaaagtcattagaattggtgcacataggtgtactggtaatcttctgcattacggtatct 2885
Query: 301 cattcatttgccaattttttgggggttcattgtacgtgctgagttatattgtgtatctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2884 cattcatttgccaattttttgggggttcattgtacgtgctgagttatattgtgtatctca 2825
Query: 361 tggtgctgggtataatatgaatttcactgttgatctttcatttattggataggattcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2824 tggtgctgggtataatatgaatttcactgttgatctttcatttattggataggattcaaa 2765
Query: 421 cattaacggatagcgttaggttcataccttttggaaagctctttcagattgaacagtcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2764 cattaacggatagcgttaggttcataccttttggaaagctctttcagattgaacagtcaa 2705
Query: 481 ttcagtggacatcttgctcttgggtttcttgatcttcgtatccggacactacaacctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2704 ttcagtggacatcttgctcttgggtttcttgatcttcgtatccggacactacaacctgtt 2645
Query: 541 aacaaatgcgactactattgaatatactgtaattacatgtatcttgtatcgtattgtacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2644 aacaaatgcgactactattgaatatactgtaattacatgtatcttgtatcgtattgtacc 2585
Query: 601 tatgaaccaaacgtattcttcatgttgaaaagtgggaaattgggaatctggatgggggca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2584 tatgaaccaaacgtattcttcatgttgaaaagtgggaaattgggaatctggatgggggca 2525
Query: 661 ggctggccgtggagg-cgtggagg-caataggcaggaatccctgggcagggtttcctggt 718
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2524 ggctggccgtggaggccgtggaggccaataggcaggaatccctgggcagggtttcctggt 2465
Query: 719 gagagtyctgggaatggctttggcaaggattcactgtgggcaggcagtttggttggacag 778
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2464 gagagtcctgggaatggctttggcaaggattcactgtgggcaggcagtttggttggacag 2405
Query: 779 ggcattggtgggcctactgctcccgagctaggctcaatcctgccattccttggaactcct 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2404 ggcattggtgggcctactgctcccgagctaggctcaatcctgccattccttggaactcct 2345
Query: 839 tctagggccaagctaggc 856
||||||||||||||||||
Sbjct: 2344 tctagggccaagctaggc 2327
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5616
Number of Sequences: 1807
Number of extensions: 5616
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)